MolBO

MolBO is a utility program for generating NBO-47 files from MOLPRO output and for calculating Mayer bond orders. It is a practical bridge between MOLPRO calculations and downstream bonding-analysis workflows that use NBO-compatible data.

8. POST-PROCESSING 8.4 Chemical Bonding Analysis VERIFIED
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Overview

MolBO is a utility program for generating NBO-47 files from MOLPRO output and for calculating Mayer bond orders. It is a practical bridge between MOLPRO calculations and downstream bonding-analysis workflows that use NBO-compatible data.

Reference Papers

Reference papers are not yet linked for this code.

Full Documentation

Official Resources

  • GitHub: https://github.com/zorkzou/MolBO
  • Project Page: https://zorkzou.github.io/MolBO/readme.html
  • Related ecosystem: Interfaces MOLPRO outputs with NBO-style workflows

Overview

MolBO is a utility program for generating NBO-47 files from MOLPRO output and for calculating Mayer bond orders. It is a practical bridge between MOLPRO calculations and downstream bonding-analysis workflows that use NBO-compatible data.

Scientific domain: Bond-order analysis, NBO interoperability, MOLPRO post-processing
Target user community: MOLPRO users needing Mayer bond orders or NBO-style downstream analysis

Theoretical Methods

  • Mayer bond order calculation
  • NBO-47 file generation
  • Extraction of overlap, Fock, and density matrices from MOLPRO outputs

Capabilities (CRITICAL)

  • Generates NBO-47 files from MOLPRO output
  • Calculates Mayer bond orders directly
  • Supports a wide range of MOLPRO methods according to the project documentation
  • Serves as a practical interface between MOLPRO and NBO-style bonding analysis
  • Public source repository and project page available

Sources: Official GitHub repository and project readme

Key Strengths

MOLPRO-Specific Utility:

  • Tailored to MOLPRO output structure
  • Helpful when direct downstream bonding analysis is cumbersome
  • Bridges MOLPRO with NBO-related workflows

Bonding Metrics:

  • Mayer bond orders included
  • Reads necessary matrix data from MOLPRO output
  • Supports many correlated and multireference methods documented by the project

Practical Interoperability:

  • Complements Molden2AIM rather than replacing it
  • Useful for format preparation and bond-order extraction
  • Clear feature/limitation documentation on the project page

Inputs & Outputs

  • Input formats:

    • MOLPRO output files with the required printed matrix information
  • Output data types:

    • NBO-47 files
    • Mayer bond orders

Workflow and Usage

  1. Run a MOLPRO calculation with the required printed matrices.
  2. Feed the MOLPRO output into MolBO.
  3. Generate the NBO-47 file and/or extract Mayer bond orders.
  4. Use the outputs in downstream bonding-analysis workflows.

Performance Characteristics

  • Lightweight task-specific utility
  • Best suited to MOLPRO-centered post-processing
  • Valuable in workflows where direct bond-order extraction or NBO interfacing is needed

Limitations & Known Constraints

  • MOLPRO dependence: Only relevant for MOLPRO users
  • Input requirements: Requires specific printed matrices in the output
  • Symmetry limitations: Repository notes restrictions involving symmetry-equivalent atoms

Comparison with Other Tools

  • vs Molden2AIM: MolBO is MOLPRO-specific and includes Mayer bond orders; Molden2AIM is a broader Molden-to-AIM/NBO converter
  • vs NBO: MolBO prepares NBO-compatible input rather than replacing the NBO analysis engine
  • Unique strength: MOLPRO-specific NBO-47 generation plus Mayer bond orders

Application Areas

  • Bond-order analysis for MOLPRO calculations
  • Preparing NBO-compatible files
  • Interoperability in correlated-wavefunction workflows
  • Weak and covalent interaction studies using Mayer bond orders

Community and Support

  • Public GitHub repository
  • Project readme and example guidance
  • Useful niche tool in the Molpro/NBO interoperability space

Verification & Sources

Primary sources:

  1. GitHub: https://github.com/zorkzou/MolBO
  2. Project page: https://zorkzou.github.io/MolBO/readme.html
  3. Repository documentation describing NBO-47 generation and Mayer bond orders

Confidence: VERIFIED

Verification status: ✅ VERIFIED

  • Public repository: ACCESSIBLE
  • Documentation: AVAILABLE
  • Primary use case: MOLPRO-to-NBO interoperability and Mayer bond-order analysis

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